Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs6932003 | chr6:26990191 | T/C | 2.66E-6 | 214 | 4.58 | 11.63 | 16.97 | KM Plot |
KIRP | rs696247 | chr1:235668161 | C/T | 0.000593 | 206 | 19.53 | 16.93 | 13.13 | KM Plot |
KIRP | rs7007550 | chr8:12607629 | C/T | 0.000337 | 214 | 13.17 | 7.43 | 17.02 | KM Plot |
KIRP | rs7009041 | chr8:28203539 | C/G | 1.32E-5 | 214 | 2.8 | 7.28 | 16.93 | KM Plot |
KIRP | rs7010714 | chr8:30047316 | G/T | 1.02E-6 | 211 | 15.33 | 18.98 | 0.2 | KM Plot |
KIRP | rs7029206 | chr9:72433081 | G/A | 0 | 208 | 15.88 | 17 | 6.7 | KM Plot |
KIRP | rs704720 | chr1:235667186 | G/A | 0.000311 | 205 | 17.03 | 16.98 | 13.1 | KM Plot |
KIRP | rs704721 | chr1:235667217 | C/G | 0.000643 | 205 | 19.53 | 16.7 | 13.13 | KM Plot |
KIRP | rs7072367 | chr10:102009980 | T/C | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
KIRP | rs7073289 | chr10:63388215 | A/G | 0 | 212 | 18.25 | 6.83 | 1.17 | KM Plot |
KIRP | rs7073610 | chr10:102006625 | A/G | 3.1E-7 | 214 | 5.7 | 19.27 | 15.33 | KM Plot |
KIRP | rs7076441 | chr10:70728298 | A/G | 8.52E-9 | 212 | 15.07 | 17 | 10.6 | KM Plot |
KIRP | rs7082884 | chr10:102008477 | C/T | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
KIRP | rs7086337 | chr10:63419013 | C/T | 0 | 207 | 18.87 | 6.83 | 3.93 | KM Plot |
KIRP | rs7093193 | chr10:102041132 | C/T | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |